This package provides a function to infer pathway activity from gene expression using PROGENy. It contains the linear model which is described in the publication "Perturbation-response genes reveal signaling footprints in cancer gene expression".

The WBXML Library (aka libwbxml) contains a library and its associated tools to Parse, Encode and Handle WBXML documents. The WBXML format is a binary representation of XML, defined by the Wap Forum, and used to reduce bandwidth in mobile communications.

Qt is a cross-platform C++ application framework. Qt's primary feature is its rich set of widgets that provide standard GUI functionality.

This package contains the OpenCV (Open Computer Vision) deep neural network module.

Amesos is the Direct Sparse Solver Package in Trilinos. The goal of Amesos is to make AX=B as easy as it sounds, at least for direct methods. Amesos provides clean and consistent interfaces to a number of third-party libraries.

Amesos2 is a package for solving sparse linear systems using direct solvers. It differs from Amesos in that it is templated on the scalar and index types. KLU2 is the only native solver.