Tabix indexes files where some columns indicate sequence coordinates: name (usually a chromosome), start and stop. The input data file must be position sorted and compressed by bgzip (provided in this package), which has a gzip like interface. After indexing, tabix is able to quickly retrieve data lines by chromosomal coordinates. Fast data retrieval also works over network if an URI is given as a file name.

This is part of a suite of python3 and Vala based applets for the Budgie Desktop that provide additional user orientated capabilities. The applets can be used individually or as a set.

Ips is an intelligent ps-like program which displays process status obtained from the /proc filesystem. It has features to make tracking of active, semi-active, and transient processes easy. It is extremely configurable, but is still efficient.

MP3val is a small, high-speed tool for MPEG audio files validation and (optionally) fixing problems.

Munipack is a general astronomical photometry software package. Currently implements functions for standard photometry processing (photometry reductions - dark, flat), aperture photometry, astrometry and photometry calibration, accessing Virtual observatory, etc.

ESyS-Particle is Open Source software for particle-based numerical modelling. The software implements the Discrete Element Method (DEM), a widely used technique for modelling processes involving large deformations, granular flow and/or fragmentation. ESyS-Particle is designed for execution on parallel supercomputers, clusters or multi-core PCs running a Linux-based operating system. The C++ simulation engine implements spatial domain decomposition via the Message Passing Interface (MPI). A Python wrapper API provides flexibility in the design of numerical models, specification of modelling parameters and contact logic, and analysis of simulation data. ESyS-Particle has been utilised to simulate earthquake nucleation, comminution in shear cells, silo flow, rock fragmentation, and fault gouge evolution, to name but a few applications.